Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005234.1 Hibiscus syriacus cultivar Beakdansim tig00011848_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  296100

Tables:   1   2   

This is table  2  of  2  ( 132 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
244207--244289
29
2.8
29
92
1
139
43
9
14
32
1.78
248972--249054
29
2.8
29
92
1
139
43
9
14
32
1.78
258356--258665
155
2.0
155
98
1
604
28
18
16
37
1.92
265533--265597
6
10.8
6
81
0
76
3
15
46
35
1.62
265533--265597
24
2.7
24
90
0
94
3
15
46
35
1.62
267630--267754
31
4.0
31
94
0
205
31
28
7
32
1.84
269794--269839
20
2.3
20
96
3
85
45
15
0
39
1.46
270946--270984
19
2.1
19
95
0
69
28
12
0
58
1.34
272255--272305
21
2.4
21
80
0
57
11
27
37
23
1.90
289123--289179
29
2.0
29
89
0
87
33
17
17
31
1.93
289176--289270
37
2.6
37
83
8
106
37
13
20
28
1.90
291856--291911
3
18.7
3
89
7
87
28
0
1
69
0.98

Tables:   1   2

The End!