Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005286.1 Hibiscus syriacus cultivar Beakdansim tig00011958_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55622

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2046--2291
59
4.3
57
80
10
254
32
11
20
35
1.88
2903--2944
2
21.0
2
100
0
84
50
0
0
50
1.00
6517--6558
21
2.0
21
95
4
77
26
19
16
38
1.92
8559--8606
22
2.2
21
82
7
60
12
12
8
66
1.44
22517--23969
81
18.0
81
85
1
1750
36
12
21
29
1.90
22517--23969
323
4.5
323
84
3
1769
36
12
21
29
1.90
22517--23969
404
3.6
402
82
4
1739
36
12
21
29
1.90
23976--24070
45
2.1
45
84
3
120
43
8
18
29
1.80
25459--25486
14
2.0
14
100
0
56
28
7
21
42
1.79
28699--32950
81
52.5
81
84
2
5011
36
12
21
29
1.91
28699--41852
243
54.3
240
82
3
13907
36
12
21
30
1.90
32890--32997
54
2.0
54
92
0
180
38
12
19
29
1.88
32809--33086
135
2.1
134
85
4
371
37
11
20
30
1.87
32944--41852
81
110.2
79
83
3
9041
36
12
20
30
1.90
32728--33166
216
2.0
216
82
4
528
38
11
20
29
1.88
32944--41852
162
55.1
161
83
2
10147
36
12
20
30
1.90
54746--54811
23
2.9
23
84
11
82
51
1
0
46
1.10
54746--54833
11
7.7
11
71
7
52
51
3
1
44
1.25
54768--54859
17
5.4
17
75
10
64
52
2
2
43
1.25
54715--54841
52
2.5
51
84
6
159
51
3
0
43
1.25
55331--55477
80
1.9
78
87
5
215
30
17
8
43
1.78

Tables:   1

The End!