Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005292.1 Hibiscus syriacus cultivar Beakdansim tig00011969_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73961

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4629--4667
20
2.0
20
85
10
53
28
7
7
56
1.55
5942--5967
13
2.0
13
100
0
52
38
15
23
23
1.92
19839--19873
2
17.5
2
100
0
70
48
0
0
51
1.00
20354--20506
45
3.4
47
82
12
194
30
21
18
29
1.97
20383--20507
46
2.7
46
90
6
193
29
21
17
31
1.96
21927--21963
18
2.0
20
84
10
51
35
5
5
54
1.47
22020--22382
192
1.9
194
85
1
505
38
10
11
39
1.76
22020--22439
192
2.2
193
82
3
472
37
10
12
39
1.77
39699--39724
12
2.2
12
100
0
52
26
7
7
57
1.54
42517--42562
24
1.9
24
86
0
65
50
0
0
50
1.00
43163--43210
23
2.1
22
85
11
62
22
6
2
68
1.23
43756--43801
24
2.0
23
87
12
67
56
0
4
39
1.19
44870--44916
24
1.9
25
86
4
69
36
6
6
51
1.53
52445--52493
26
1.9
26
87
4
73
46
14
8
30
1.73
54996--55213
103
2.1
103
98
0
418
24
12
24
38
1.91
55242--55292
23
2.2
23
86
6
68
23
25
21
29
1.99
55493--55530
20
1.9
20
89
10
60
31
5
5
57
1.43
61982--62199
103
2.1
103
97
0
409
25
12
24
38
1.90
62216--62278
23
2.7
23
85
4
83
19
28
26
25
1.98
64764--64843
41
2.0
41
85
5
108
27
20
17
35
1.95
64764--64855
41
2.2
41
82
3
96
27
19
18
34
1.95
71314--71549
114
2.1
114
95
0
427
35
16
19
28
1.94

Tables:   1

The End!