Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005313.1 Hibiscus syriacus cultivar Beakdansim tig00012028_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  182071

Tables:   1   2   

This is table  2  of  2  ( 126 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
168734--168804
2
37.5
2
79
10
69
52
1
2
43
1.24
170455--170511
6
9.7
6
80
17
50
0
14
0
85
0.59
170465--170514
8
6.5
8
84
15
70
0
12
0
88
0.53
170460--170516
14
3.9
14
84
13
78
0
14
0
85
0.59
172605--172647
22
2.0
22
90
0
68
32
23
18
25
1.97
175702--175795
46
2.0
46
97
0
179
20
21
23
35
1.96

Tables:   1   2

The End!