Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005334.1 Hibiscus syriacus cultivar Beakdansim tig00012079_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  253824

Tables:   1   2   

This is table  2  of  2  ( 137 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
222534--222558
2
12.5
2
100
0
50
48
0
0
52
1.00
223325--223485
64
2.5
63
85
8
200
26
21
18
33
1.96
229670--229727
26
2.3
25
88
11
91
50
6
6
36
1.56
229849--229999
77
2.0
77
89
0
230
39
21
9
29
1.86
232894--232935
16
2.6
16
81
11
50
47
7
4
40
1.52
233243--233347
2
57.5
2
77
17
86
56
0
0
42
1.06
233242--233349
7
15.4
7
77
12
73
56
0
0
42
1.05
233245--233293
23
2.0
25
88
7
75
59
2
0
38
1.09
233247--233327
34
2.3
35
87
8
119
58
1
0
40
1.06
234335--234403
29
2.4
29
77
0
75
44
1
0
53
1.09
234525--234565
17
2.7
16
82
17
52
63
0
0
36
0.95
236741--237108
183
2.0
183
89
0
556
24
15
19
40
1.90
240608--240654
23
2.0
25
88
12
73
40
0
0
59
0.97
242394--242764
200
1.9
200
85
3
514
24
14
19
41
1.89
248045--248111
28
2.4
28
95
2
118
41
7
16
34
1.76
248394--248441
21
2.4
21
82
6
64
43
10
0
45
1.38
249779--249808
2
15.0
2
92
0
51
46
0
3
50
1.18

Tables:   1   2

The End!