Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005378.1 Hibiscus syriacus cultivar Beakdansim tig00012275_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  184360

Tables:   1   2   

This is table  2  of  2  ( 130 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
175235--175674
99
4.3
100
73
14
344
39
11
15
33
1.84
175550--175631
37
2.2
35
76
16
85
41
12
15
30
1.84
178538--178605
18
3.9
17
79
14
77
1
16
1
80
0.85
178547--178605
16
3.9
15
75
18
52
0
16
1
81
0.78
178538--178621
29
2.9
27
81
12
87
1
16
2
79
0.90
178550--178639
17
5.5
17
73
13
64
2
15
3
78
0.97
178550--178621
30
2.3
30
85
7
99
0
16
2
80
0.83
178553--178611
15
3.9
15
76
14
50
0
18
1
79
0.81
178550--178654
42
2.6
40
82
11
117
1
16
4
77
1.03
181602--181648
24
2.0
24
91
8
78
25
17
29
27
1.97

Tables:   1   2

The End!