Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005412.1 Hibiscus syriacus cultivar Beakdansim tig00012410_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53666

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32--153
62
2.0
60
96
3
226
36
9
29
23
1.87
10725--10783
32
1.9
29
86
10
82
40
3
5
50
1.41
16064--16128
32
2.0
32
100
0
130
20
0
24
55
1.43
16073--16141
32
2.2
31
87
7
95
23
1
24
50
1.57
16228--16274
21
2.2
21
96
0
85
27
31
19
21
1.97
16270--16383
21
5.6
21
76
4
81
20
21
22
35
1.96
16310--16442
21
6.5
21
71
8
103
19
19
26
34
1.96
17268--17339
21
3.5
20
73
17
67
34
23
20
20
1.96
17286--17376
20
4.4
21
75
14
82
37
18
20
23
1.94
17268--17359
41
2.2
41
94
0
166
35
22
20
20
1.96
17268--17376
41
2.7
41
89
0
164
35
21
21
22
1.96
17911--17996
26
3.2
26
71
3
73
40
4
1
53
1.29
17931--17997
18
3.7
18
74
7
64
40
2
1
55
1.24
29076--29115
21
2.0
20
85
5
53
22
10
20
47
1.79
35252--35286
13
2.8
13
91
4
54
57
0
0
42
0.99
38281--38321
8
5.2
8
82
5
57
34
0
29
36
1.58
38389--38869
126
3.8
126
97
0
908
21
25
20
32
1.98
39867--39960
21
4.5
21
92
5
129
20
26
35
18
1.95
39964--40011
21
2.3
21
85
0
60
22
12
39
25
1.89
41729--41816
31
2.7
31
80
5
95
59
2
0
38
1.10
41729--41807
34
2.4
33
83
6
99
60
1
0
37
1.05
41762--41837
33
2.3
34
84
8
95
64
5
0
30
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44485--44515
2
15.5
2
100
0
62
51
0
0
48
1.00
48180--48220
16
2.6
16
88
3
57
29
21
12
36
1.90

Tables:   1

The End!