Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005440.1 Hibiscus syriacus cultivar Beakdansim tig00012467_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57320

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9592--9673
33
2.6
32
88
9
116
40
6
1
52
1.34
9615--9685
29
2.4
28
83
6
79
38
7
1
53
1.37
20733--20830
36
2.7
37
80
9
105
27
3
1
68
1.11
20746--20829
29
2.8
30
80
8
100
28
1
0
70
0.95
20753--20829
3
27.0
3
76
15
74
29
1
0
68
0.97
20747--20825
39
2.0
39
83
9
99
27
1
0
70
0.95
21443--21474
12
2.6
13
90
9
50
15
9
0
75
1.05
21524--21604
32
2.5
32
75
15
78
16
12
1
70
1.23
31678--31702
13
1.9
13
100
0
50
76
0
16
8
1.02
32568--32857
116
2.4
120
86
4
392
34
23
15
27
1.94
33880--34179
150
2.0
150
94
0
528
30
14
17
38
1.89
34852--34943
35
2.5
36
77
7
96
25
3
2
69
1.15
34912--34945
3
11.3
3
87
12
52
32
0
0
67
0.91
35074--35124
19
2.7
18
79
11
50
15
7
1
74
1.13
35163--35205
5
7.8
5
80
19
50
23
4
0
72
1.04
35163--35211
18
2.9
16
75
24
55
24
4
0
71
1.03
35648--35725
39
2.0
38
83
11
97
16
11
1
70
1.23
35693--35784
43
2.1
43
82
7
107
18
9
2
69
1.26
35715--35772
24
2.5
24
80
11
66
18
5
1
74
1.10
44686--44761
33
2.3
33
100
0
152
38
21
25
15
1.92
48148--48191
17
2.8
16
80
19
56
40
0
0
59
0.98
56800--56845
20
2.4
19
85
7
65
54
10
15
19
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56590--57060
177
2.6
179
86
4
637
42
13
16
28
1.86

Tables:   1

The End!