Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000545.1 Hibiscus syriacus cultivar Beakdansim tig00001056_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46040

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8867--8917
12
4.2
12
82
7
68
52
0
0
47
1.00
9215--9681
190
2.4
189
84
5
602
26
20
15
36
1.93
9730--9891
20
8.1
20
87
0
198
41
19
16
22
1.90
17945--17989
9
4.7
9
84
15
63
53
0
0
46
1.00
17946--17986
21
2.0
21
95
0
73
51
0
0
48
1.00
23278--23325
13
3.4
14
88
8
71
56
0
0
43
0.99
23454--23490
16
2.3
16
100
0
74
5
35
5
54
1.47
26280--26351
23
3.0
23
82
11
83
55
26
1
16
1.49
32186--32225
21
1.9
21
85
10
55
35
10
2
52
1.48
34115--34168
21
2.6
21
91
5
83
14
20
46
18
1.84
42231--42270
19
2.1
19
86
9
55
47
12
2
37
1.55
42863--42899
16
2.3
16
90
9
58
32
10
0
56
1.34
42879--43273
61
6.9
56
78
11
215
43
13
6
36
1.71
42904--43214
61
5.3
60
82
7
299
43
13
7
35
1.73
42940--43273
59
5.7
59
78
8
173
42
14
7
36
1.73
43273--43440
54
3.0
55
82
10
180
42
10
7
39
1.66
43571--43778
45
4.6
44
79
6
179
39
15
8
36
1.79
45541--45675
57
2.4
59
76
12
138
42
5
11
40
1.64

Tables:   1

The End!