Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000556.1 Hibiscus syriacus cultivar Beakdansim tig00001086_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  359109

Tables:   1   2   

This is table  2  of  2  ( 140 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
284009--284057
21
2.3
21
92
0
80
20
18
30
30
1.96
284994--285026
17
2.0
17
88
5
50
66
0
0
33
0.92
295357--295504
74
2.0
76
97
2
282
16
18
37
26
1.93
298081--298128
20
2.4
22
77
22
61
45
0
4
50
1.21
306377--306402
5
5.2
5
100
0
52
38
0
19
42
1.51
306724--306765
21
1.9
22
85
9
59
28
26
26
19
1.98
306919--307068
20
8.1
20
68
27
80
42
6
14
36
1.70
306930--307097
54
3.1
54
100
0
336
42
5
16
35
1.72
308868--308905
3
12.7
3
100
0
76
65
0
0
34
0.93
312964--313055
38
2.4
38
87
0
130
25
23
26
25
2.00
313213--313254
20
2.0
21
86
4
59
45
7
7
40
1.59
313548--313943
197
2.0
197
97
0
747
22
17
21
37
1.94
316324--316354
14
2.3
14
94
5
55
35
25
3
35
1.72
318378--318420
21
2.0
21
86
0
59
60
0
4
34
1.17
321208--321247
21
2.0
20
95
5
71
37
12
10
40
1.77
334084--334151
33
2.1
33
100
0
136
32
26
11
29
1.92
352864--352956
21
4.3
20
82
9
69
30
25
18
25
1.98
352879--352956
21
3.6
21
86
10
104
29
25
20
24
1.99
353064--353096
15
2.3
15
89
5
50
33
27
6
33
1.81
357583--357645
23
2.7
23
73
7
65
42
4
0
52
1.22

Tables:   1   2

The End!