Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005575.1 Hibiscus syriacus cultivar Beakdansim tig00012936_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  214437

Tables:   1   2   

This is table  2  of  2  ( 162 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
186348--186405
29
2.0
29
96
0
107
13
32
25
27
1.94
188454--188493
2
20.5
2
89
5
64
52
0
2
45
1.14
189887--189959
23
3.2
23
92
0
119
38
21
5
34
1.77
190327--190389
23
2.7
23
92
0
99
38
20
4
36
1.74
189724--192034
429
5.4
430
95
2
4153
40
12
7
39
1.71
190756--190814
22
2.6
23
86
2
75
37
18
5
38
1.73
191181--191243
23
2.7
23
92
0
99
38
20
4
36
1.74
191594--191666
23
3.2
23
81
14
96
41
20
2
35
1.67
189724--192034
852
2.7
854
95
1
4196
40
12
7
39
1.71
192271--192340
34
2.1
32
86
5
95
22
30
15
31
1.95
192555--192594
21
1.9
22
90
10
66
12
10
40
37
1.77
192622--192664
21
2.0
21
95
0
77
27
27
20
23
1.99
192777--192836
20
3.2
20
75
22
76
8
25
43
23
1.81
192946--193005
29
2.0
31
90
6
97
41
16
6
35
1.75
194263--194310
19
2.5
20
82
3
62
29
12
6
52
1.63
195445--195484
21
1.9
22
90
10
66
12
10
40
37
1.77
195512--195554
21
2.0
21
95
0
77
27
27
20
23
1.99
195590--195628
20
2.0
20
100
0
78
15
25
46
12
1.81
195666--195725
20
3.2
20
77
22
85
10
26
40
23
1.86
195687--195716
15
2.0
15
100
0
60
13
26
33
26
1.93
195832--195891
29
2.0
31
90
6
97
41
18
6
33
1.76
195925--195984
23
2.6
23
89
0
84
40
16
3
40
1.65
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
198370--198860
183
2.7
183
96
0
885
33
16
14
35
1.90
199250--199312
23
2.7
23
92
0
99
38
20
4
36
1.74
199674--199707
16
2.1
16
94
0
59
26
20
5
47
1.73
200900--200972
3
24.3
3
77
0
65
23
32
5
38
1.78
200900--200985
18
4.8
18
83
0
100
22
32
5
39
1.78
200916--200980
24
2.7
24
85
0
94
21
33
7
36
1.82
200904--200985
6
13.7
6
78
0
74
20
32
6
40
1.77
202440--203607
198
5.9
199
96
1
2159
31
17
14
36
1.90
203726--203774
19
2.6
19
93
0
80
57
10
2
30
1.43
204493--204535
21
2.0
21
81
0
50
30
30
25
13
1.94
204515--204662
66
2.2
67
85
4
194
28
26
26
18
1.98
204965--205032
28
2.5
29
81
11
81
38
10
13
38
1.78
205047--205104
28
2.0
30
86
10
84
37
6
22
32
1.81
205323--205389
22
3.0
22
100
0
134
19
26
26
26
1.99
211407--211449
21
2.0
21
81
0
50
30
30
25
13
1.94
211407--211582
67
2.6
68
84
8
207
28
26
27
18
1.98
211429--211582
68
2.2
68
86
5
204
27
26
27
18
1.98
211885--211956
29
2.5
29
93
0
117
38
9
12
38
1.76
211971--212030
30
2.0
31
90
3
95
36
6
23
33
1.81
212247--212313
22
3.0
22
100
0
134
19
26
26
26
1.99

Tables:   1   2

The End!