Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000562.1 Hibiscus syriacus cultivar Beakdansim tig00001099_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63276

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2063--2153
31
3.0
31
96
3
168
32
6
17
42
1.75
2216--2257
21
2.0
21
95
0
75
23
21
28
26
1.99
2286--2325
20
1.9
22
90
10
66
37
35
10
17
1.83
2540--2609
34
2.1
32
89
5
104
31
15
31
21
1.95
5435--5634
94
2.1
95
86
2
287
40
14
21
23
1.90
5969--6297
55
6.0
55
91
1
525
36
10
17
35
1.85
7036--7087
23
2.3
23
93
0
86
23
26
19
30
1.98
8538--8766
103
2.2
103
79
5
228
55
10
2
30
1.48
8936--8987
25
2.1
25
92
0
86
32
21
17
28
1.96
9237--9278
17
2.6
16
78
14
50
52
11
9
26
1.68
9477--9516
20
1.9
20
85
10
53
47
12
0
40
1.41
16020--16103
41
2.0
41
97
0
159
30
28
4
35
1.78
18167--18242
37
2.0
38
82
14
95
42
5
6
46
1.52
18691--18773
40
2.1
40
100
0
166
45
0
9
44
1.36
18769--18795
2
13.5
2
100
0
54
51
0
0
48
1.00
30755--30915
64
2.5
65
86
7
204
33
18
21
26
1.96
31406--31440
18
1.9
18
88
11
54
54
5
17
22
1.64
45067--45107
20
2.1
19
86
4
55
63
0
0
36
0.95
46225--46264
20
2.0
21
90
5
64
42
5
10
42
1.60
52945--53019
23
3.3
23
76
0
78
22
26
18
32
1.97
54034--54094
23
2.7
23
89
0
95
29
26
26
18
1.98
55531--55582
19
2.7
19
82
8
61
30
30
13
25
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59022--59082
23
2.7
23
86
0
86
31
26
24
18
1.97
60475--60532
20
2.7
20
86
10
71
27
22
18
31
1.97
61864--61938
23
3.4
22
82
8
98
32
28
17
22
1.96

Tables:   1

The End!