Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005620.1 Hibiscus syriacus cultivar Beakdansim tig00013072_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77040

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
234--295
28
2.2
28
94
0
106
38
11
25
24
1.88
2887--2920
16
2.1
16
94
0
59
38
8
11
41
1.73
6605--6645
15
2.6
15
88
7
55
2
31
0
65
1.05
12148--12191
23
1.9
23
81
9
54
52
2
0
45
1.13
12184--12221
13
2.9
13
85
11
51
23
0
2
73
0.95
12184--12215
7
4.9
7
88
11
50
25
0
0
75
0.81
16206--16270
29
2.2
31
88
8
107
13
16
10
58
1.63
16209--16314
33
3.5
29
81
12
122
15
12
11
61
1.57
16209--16314
30
3.5
30
82
8
124
15
12
11
61
1.57
17534--17559
13
2.0
13
100
0
52
23
15
7
53
1.67
18976--19818
449
1.9
449
94
0
1481
24
27
23
24
2.00
29331--29384
23
2.5
22
87
6
83
35
18
18
27
1.94
33811--33918
46
2.4
46
78
13
125
34
20
18
26
1.96
35909--35961
21
2.5
20
84
6
61
52
1
7
37
1.41
42548--42672
64
1.9
65
83
4
164
30
22
19
28
1.98
42660--42711
19
2.7
19
93
0
86
21
28
23
26
1.99
48913--48985
29
2.4
31
75
4
78
28
20
5
45
1.73
53003--53081
26
3.1
26
73
10
72
37
6
21
34
1.79
53083--53443
183
2.0
184
93
0
625
28
22
17
31
1.97
56501--56549
19
2.5
20
80
12
57
57
2
6
34
1.35
68586--68622
15
2.6
15
83
8
51
59
0
2
37
1.12

Tables:   1

The End!