Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005625.1 Hibiscus syriacus cultivar Beakdansim tig00013097_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60317

Tables:   1   

This is table  1  of  1  ( 48 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2432--2810
201
1.9
202
93
0
652
28
16
17
36
1.92
3876--4249
190
2.0
190
94
0
649
29
17
17
35
1.93
6306--6684
201
1.9
201
92
1
643
30
17
17
35
1.92
5277--7229
980
2.0
973
95
0
3503
31
17
16
34
1.92
7777--8168
201
1.9
202
90
0
615
28
16
17
36
1.92
8730--8770
22
1.9
21
90
5
64
2
9
9
78
1.06
9257--9645
201
1.9
202
93
0
672
29
17
17
35
1.93
10726--11117
201
1.9
202
95
0
705
29
16
17
36
1.92
12172--12550
201
1.9
201
92
1
643
29
16
16
36
1.91
13654--14032
201
1.9
202
92
0
643
29
16
17
36
1.92
15114--15502
201
1.9
202
94
0
690
29
16
17
35
1.93
16555--16933
201
1.9
201
91
1
625
30
16
16
36
1.91
17194--17227
17
2.0
17
88
0
50
41
0
29
29
1.57
18026--18417
201
1.9
202
93
0
669
29
16
17
36
1.92
19508--19883
201
1.9
202
95
0
682
29
15
17
36
1.92
20129--20162
17
2.0
17
88
0
50
41
0
29
29
1.57
20357--20413
27
2.2
25
81
15
62
8
15
3
71
1.24
20683--20727
6
7.7
6
87
2
65
57
0
28
13
1.36
20687--20727
12
3.4
12
93
0
73
56
0
29
14
1.39
20988--21574
202
2.9
201
93
1
996
29
16
18
35
1.93
21827--21872
17
2.6
18
82
6
58
39
0
32
28
1.57
22639--23022
202
1.9
203
95
0
689
29
15
17
36
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23583--23632
19
2.6
18
84
9
55
0
14
4
82
0.82
27539--27585
6
8.2
6
86
13
55
0
14
2
82
0.75
27539--27576
16
2.5
15
91
4
58
0
18
0
81
0.69
27541--27584
17
2.6
16
82
10
52
0
13
2
84
0.73
27539--27579
22
2.0
20
86
13
57
0
17
0
82
0.66
33750--33829
30
2.8
28
81
11
90
72
0
7
20
1.08
33766--33813
9
5.0
9
78
12
51
75
0
10
14
1.06
33766--33820
20
2.8
19
74
17
58
74
0
9
16
1.06
33823--33849
5
5.4
5
100
0
54
62
0
0
37
0.95
33812--33878
15
4.5
16
71
21
65
70
0
2
26
1.02
34974--35014
21
2.0
20
85
4
55
70
2
0
26
0.99
35023--35077
26
2.2
26
83
3
67
43
7
7
41
1.60
35097--35182
31
2.5
35
81
14
117
46
11
2
39
1.53
37498--37565
13
4.9
14
73
10
68
64
1
4
29
1.21
37720--37814
4
23.8
4
100
0
190
50
25
0
24
1.49
38677--38724
6
8.2
6
86
9
55
0
14
2
83
0.74
38677--38723
15
3.1
15
84
9
60
0
14
2
82
0.75
38677--38725
10
4.8
10
80
12
55
0
14
2
83
0.73
38677--38724
19
2.3
20
86
10
62
0
14
2
83
0.74
39759--42715
4
747.0
4
97
2
5697
25
0
24
50
1.50
43270--43369
25
4.1
25
89
7
143
48
17
10
25
1.78
43276--43367
47
2.0
47
95
0
166
47
18
9
23
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43823--43859
15
2.3
17
86
9
51
54
0
5
40
1.24
43895--43951
16
3.6
16
77
11
55
42
12
19
26
1.86
49705--49740
18
2.1
18
90
10
58
55
0
11
33
1.35
49720--49967
134
1.9
134
86
4
360
44
5
3
46
1.44

Tables:   1

The End!