Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005641.1 Hibiscus syriacus cultivar Beakdansim tig00013148_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  90049

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
944--982
18
2.1
19
95
4
71
48
23
5
23
1.70
5969--6018
20
2.6
19
78
6
55
38
0
10
52
1.35
8836--8882
2
23.5
2
100
0
94
51
0
0
48
1.00
11843--11975
42
3.2
42
90
4
207
45
14
23
17
1.85
11843--11998
42
3.7
42
86
10
189
43
14
23
19
1.87
11934--12509
273
2.1
273
84
2
728
29
19
23
27
1.98
20251--21031
51
14.8
55
90
2
692
28
26
16
28
1.97
20409--21026
51
11.9
51
92
2
914
27
27
15
29
1.96
22399--22474
7
10.7
7
77
17
61
10
11
0
77
0.99
22386--22461
31
2.5
30
85
10
109
10
11
0
77
0.99
22398--22478
15
5.6
14
80
16
87
9
12
0
77
0.98
32123--32211
45
1.9
47
93
4
155
37
23
11
28
1.89
41059--41093
2
17.5
2
100
0
70
48
0
0
51
1.00
41314--41675
186
1.9
186
92
0
607
41
2
9
46
1.51
43410--43453
22
2.0
22
86
4
63
29
4
2
63
1.26
44746--44787
19
2.2
19
91
0
66
52
4
16
26
1.63
49554--49589
3
12.0
3
100
0
72
33
33
0
33
1.58
56905--57731
338
2.4
341
79
10
846
26
18
18
36
1.94
74235--74818
20
28.2
20
79
8
451
37
26
19
16
1.92
74237--74810
42
13.9
41
85
7
593
37
26
19
16
1.93
74238--74810
62
9.2
60
82
8
486
37
26
19
16
1.93
74875--74977
6
17.5
6
97
1
183
31
52
16
0
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75474--75596
6
21.5
6
99
0
204
0
17
52
30
1.44
75678--75829
20
7.2
20
68
19
78
15
19
23
42
1.89
75693--75746
26
2.1
26
96
0
99
14
18
24
42
1.88
86982--87034
26
2.0
27
82
10
65
9
43
3
43
1.55
89798--89837
19
2.0
21
90
9
66
27
17
5
50
1.67

Tables:   1

The End!