Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005655.1 Hibiscus syriacus cultivar Beakdansim tig00013225_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  194601

Tables:   1   2   

This is table  2  of  2  ( 133 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
184624--184700
37
2.1
37
100
0
154
41
5
12
40
1.66
187275--187303
2
14.5
2
100
0
58
51
0
0
48
1.00
187488--187519
15
2.1
15
94
0
55
53
6
15
25
1.65
187784--187853
31
2.2
29
77
20
70
47
0
4
48
1.21
187884--187934
23
2.2
23
82
0
57
45
1
1
50
1.24
187922--187992
19
3.6
19
70
10
54
47
1
1
49
1.18
187953--188116
30
5.4
29
75
15
111
53
1
0
45
1.08
188040--188134
23
4.1
23
72
18
72
51
0
0
48
1.00
188338--188429
42
2.2
42
92
0
148
46
21
16
15
1.83
190446--190485
21
2.0
20
90
5
62
22
20
30
27
1.98
191370--191503
59
2.3
57
80
12
146
38
14
17
30
1.89
191791--191897
5
22.8
5
87
12
165
60
0
0
39
0.97
191791--191903
47
2.5
47
91
7
180
61
0
0
38
0.96

Tables:   1   2

The End!