Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005679.1 Hibiscus syriacus cultivar Beakdansim tig00013278_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  141915

Tables:   1   2   

This is table  2  of  2  ( 131 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
120405--120467
12
5.6
11
76
16
51
23
0
6
69
1.11
120432--120472
12
3.4
12
90
9
66
26
0
4
68
1.10
131977--132027
6
8.7
6
91
8
79
84
0
15
0
0.63
131977--132027
13
4.3
12
88
11
79
84
0
15
0
0.63
131976--132027
19
3.0
17
86
13
79
82
0
17
0
0.66
131978--132031
25
2.2
25
90
6
83
83
0
16
0
0.65
132891--133356
44
10.6
44
68
7
230
28
20
21
29
1.98
132860--133361
133
3.8
133
93
1
798
28
20
21
29
1.98
133350--133428
33
2.4
33
79
10
90
34
16
21
27
1.95
134687--134726
16
2.4
16
87
8
53
27
0
2
70
1.01
134691--134731
16
2.6
16
78
17
50
26
0
4
68
1.10

Tables:   1   2

The End!