Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005693.1 Hibiscus syriacus cultivar Beakdansim tig00013318_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66767

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6217--6281
30
2.2
29
86
2
85
46
12
10
30
1.76
7260--7325
23
2.9
23
90
0
96
24
19
19
36
1.95
7863--7960
14
6.9
14
82
3
97
24
31
21
22
1.98
7863--7960
43
2.3
42
83
3
115
24
31
21
22
1.98
7863--7956
29
3.3
29
86
1
127
25
30
21
22
1.98
8930--8987
27
2.1
27
83
0
71
46
17
10
25
1.79
14069--14107
21
1.9
21
94
5
71
15
10
35
38
1.81
21847--22100
123
2.0
123
86
6
350
22
14
14
49
1.79
21873--22100
123
1.9
123
88
3
352
22
13
15
48
1.80
25674--25734
23
2.7
23
86
0
95
27
27
26
18
1.98
29561--29643
13
6.2
13
77
17
82
74
8
16
0
1.05
29599--29637
20
1.9
21
84
5
53
74
10
15
0
1.07
31305--31439
36
3.8
36
85
3
173
32
17
11
38
1.86
31305--31445
71
2.0
72
87
1
203
31
17
11
40
1.84
31405--31858
104
4.3
103
83
7
542
31
17
10
40
1.84
31432--31858
211
2.0
208
84
7
562
31
16
11
40
1.84
31904--32139
68
3.5
65
81
10
255
32
12
13
40
1.83
32110--32172
33
1.9
33
90
6
101
31
17
12
38
1.87
32093--32252
28
5.4
28
78
14
121
30
13
13
42
1.83
32143--32252
57
1.9
58
82
12
138
28
10
15
45
1.80
32300--32377
29
2.7
29
87
2
102
26
16
14
42
1.86
32300--32406
30
3.6
29
85
1
115
25
21
14
39
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32537--32868
134
2.5
133
84
4
425
26
30
18
25
1.98
32795--32912
43
2.9
41
82
7
132
22
29
18
28
1.98
33584--33611
12
2.3
12
100
0
56
7
0
0
92
0.37
34096--34487
127
3.0
128
87
2
536
21
16
14
47
1.82
35567--35597
16
1.9
16
93
0
53
29
6
6
58
1.48
47808--47841
18
1.9
17
88
5
50
2
14
2
79
0.97
50670--50752
29
2.7
29
77
17
80
22
13
14
49
1.78
51851--51888
20
1.9
20
88
0
58
34
13
21
31
1.91
51961--52007
24
2.0
22
84
8
58
42
21
6
29
1.77
52628--52658
16
1.9
16
93
0
53
25
12
32
29
1.93
53434--53489
23
2.6
21
76
15
60
30
14
21
33
1.93
55477--55521
19
2.3
20
84
3
56
40
24
17
17
1.91
64687--64736
21
2.3
21
82
3
64
60
0
2
38
1.09
64830--64863
14
2.5
13
86
13
50
76
2
0
20
0.92
65715--65770
20
2.8
20
81
2
60
7
17
17
57
1.62
66229--66288
3
20.0
3
83
10
70
60
0
0
40
0.97
66467--66593
45
2.8
45
89
2
193
34
18
22
23
1.96
66612--66714
45
2.3
45
88
1
145
33
19
20
26
1.96
66516--66767
122
2.1
121
92
1
416
33
19
21
26
1.97

Tables:   1

The End!