Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005704.1 Hibiscus syriacus cultivar Beakdansim tig00013339_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  232903

Tables:   1   2   

This is table  2  of  2  ( 139 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
198298--198437
63
2.2
63
85
10
187
37
22
18
21
1.94
200484--200557
31
2.4
31
86
0
103
27
20
12
40
1.87
201915--201965
10
4.8
11
76
13
54
17
0
1
80
0.81
201917--201966
21
2.3
21
89
3
73
18
0
2
80
0.82
201917--201962
13
3.9
12
81
18
53
19
0
2
78
0.86
202215--202271
8
6.9
8
84
4
51
75
0
0
24
0.80
202215--202249
18
2.0
18
94
5
63
82
0
0
17
0.66
202215--202275
26
2.4
25
81
8
68
75
0
0
24
0.80
205030--205079
23
2.2
23
92
0
82
44
10
16
30
1.80
207286--207343
2
29.0
2
100
0
116
50
0
0
50
1.00
209701--210462
187
4.1
187
96
0
1375
29
19
12
38
1.88
215376--215427
23
2.3
23
96
0
95
21
25
15
38
1.92
218896--218973
31
2.5
31
87
6
104
37
5
10
47
1.60
218953--218987
17
2.1
17
89
10
54
31
11
5
51
1.61
221458--221502
19
2.5
19
80
16
51
57
2
0
40
1.11
222623--222658
3
12.3
3
94
5
65
69
0
0
30
0.89
223739--223812
27
2.8
27
88
8
100
43
2
0
54
1.14
226142--226232
30
3.2
30
65
24
79
40
10
2
46
1.51
226151--226232
27
3.0
28
66
10
78
42
12
1
43
1.49

Tables:   1   2

The End!