Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005749.1 Hibiscus syriacus cultivar Beakdansim tig00013446_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  235396

Tables:   1   2   

This is table  2  of  2  ( 130 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
212288--212327
18
2.2
18
90
0
62
12
17
40
30
1.86
215663--215723
22
2.7
23
78
19
58
16
14
11
57
1.65
219819--219998
65
2.8
61
78
17
177
27
19
23
28
1.98
219838--219998
65
2.5
65
86
5
220
27
19
23
29
1.98
220502--220574
2
36.5
2
100
0
146
50
0
0
49
1.00
229527--229787
2
141.5
2
69
26
161
53
3
1
41
1.27
229524--229731
31
7.0
30
79
18
206
54
2
0
41
1.20
229523--229788
55
4.9
54
75
18
227
54
3
1
40
1.27
229550--229787
64
3.7
64
81
13
215
53
3
1
41
1.27
229522--229788
31
9.4
29
74
18
158
54
2
1
40
1.27

Tables:   1   2

The End!