Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005842.1 Hibiscus syriacus cultivar Beakdansim tig00013706_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  197362

Tables:   1   2   

This is table  2  of  2  ( 128 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
179394--179489
16
6.0
15
69
17
59
4
20
1
73
1.05
179444--179503
21
3.0
20
81
11
70
3
21
0
75
0.95
180184--180275
7
13.1
7
71
12
64
4
20
0
75
0.98
180184--180248
21
3.2
20
89
8
87
6
16
0
76
0.97
180184--180280
15
7.1
13
72
16
72
4
20
0
75
0.97
187335--187368
16
2.1
16
89
10
52
61
0
5
32
1.20
191892--191943
26
2.1
23
82
10
59
36
9
3
50
1.54
192156--192296
54
2.7
52
84
5
185
31
19
14
34
1.93

Tables:   1   2

The End!