Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005857.1 Hibiscus syriacus cultivar Beakdansim tig00013755_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51475

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
834--872
2
19.5
2
100
0
78
51
0
0
48
1.00
1685--1709
3
8.3
3
100
0
50
0
32
0
68
0.90
3723--3787
33
1.9
34
84
9
89
23
3
4
69
1.21
5267--5314
23
2.1
23
84
0
60
41
10
4
43
1.58
5673--5711
18
2.2
17
90
4
60
28
0
12
58
1.34
9236--9299
18
3.4
18
81
8
83
18
23
26
31
1.98
11481--11522
19
2.2
19
86
0
57
42
23
0
33
1.55
13441--13504
32
2.0
32
100
0
128
53
6
28
12
1.62
18105--18371
136
2.0
131
88
6
392
40
18
10
29
1.84
24125--24149
13
1.9
13
100
0
50
60
0
0
40
0.97
25067--25091
13
1.9
13
100
0
50
60
0
0
40
0.97
26212--26245
12
2.7
13
86
9
52
41
5
8
44
1.60
28000--28035
12
2.9
12
87
4
54
50
5
8
36
1.56
32211--32253
20
2.1
20
82
4
50
30
11
4
53
1.57
34324--34437
54
2.1
54
95
0
201
29
12
23
34
1.91
35953--35984
15
2.1
15
94
0
55
15
3
43
37
1.63
36730--36826
32
3.0
32
87
0
140
32
14
9
43
1.77
36897--36968
32
2.2
32
92
0
117
37
12
6
43
1.70
36752--37110
140
2.6
140
88
2
528
36
16
9
37
1.81
37030--37109
32
2.5
32
87
2
106
35
17
8
38
1.81
37599--37636
20
1.9
20
94
0
67
21
13
28
36
1.91
39009--39162
3
51.0
3
89
3
238
65
0
30
3
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41007--41056
21
2.5
20
83
3
55
28
4
26
42
1.73
42211--42325
37
3.1
36
81
8
117
18
6
16
59
1.57
43758--43807
2
25.0
2
100
0
100
50
0
0
50
1.00
50465--50572
36
3.0
36
90
0
135
34
25
1
38
1.67

Tables:   1

The End!