Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01005960.1 Hibiscus syriacus cultivar Beakdansim tig00014004_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  221916

Tables:   1   2   

This is table  2  of  2  ( 132 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
197090--197192
51
2.0
51
98
0
197
25
17
6
50
1.70
197505--197529
2
12.5
2
100
0
50
48
0
0
52
1.00
198534--198559
11
2.4
11
100
0
52
30
26
15
26
1.96
198904--198937
16
2.1
17
88
5
52
35
0
0
64
0.94
200697--201072
185
2.0
185
92
1
630
45
8
3
42
1.52
202956--203011
19
3.0
18
82
12
60
10
16
8
64
1.49
202956--203000
19
2.4
19
92
0
72
11
17
6
64
1.46
205020--205068
19
2.6
19
80
6
55
14
20
8
57
1.63
211595--211634
21
1.9
21
89
0
62
27
25
25
22
2.00
213077--213108
13
2.3
15
89
10
50
62
6
3
28
1.34
214039--214110
29
2.4
30
80
11
69
20
19
8
51
1.72
221049--221081
16
2.0
17
88
5
50
51
12
6
30
1.63

Tables:   1   2

The End!