Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006005.1 Hibiscus syriacus cultivar Beakdansim tig00014158_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  182743

Tables:   1   2   

This is table  2  of  2  ( 138 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
162354--162405
25
2.0
28
88
11
83
28
0
1
69
0.99
162423--162462
11
3.6
11
93
0
62
22
5
5
67
1.30
162419--162463
11
4.2
11
88
2
56
20
4
4
71
1.21
162931--162977
9
5.2
9
82
10
51
31
0
0
68
0.90
162939--163001
28
2.3
27
81
8
72
36
0
0
63
0.95
164233--164269
19
1.9
19
89
10
58
8
24
0
67
1.17
168209--168285
22
3.5
22
90
0
127
36
28
14
20
1.92
169124--170590
106
13.9
106
89
2
2125
34
24
17
23
1.96
171318--171422
37
2.8
37
88
0
156
40
14
15
30
1.87
172036--172086
25
2.0
25
88
7
75
29
0
1
68
1.00
172104--172144
11
3.6
11
87
6
55
24
4
4
65
1.32
172543--172579
2
19.0
2
94
5
67
48
0
0
51
1.00
172617--172677
27
2.2
29
85
11
83
26
4
3
65
1.28
172703--172800
30
3.3
29
75
13
76
17
5
3
74
1.13
172741--172805
28
2.4
27
76
16
64
15
7
3
73
1.18
174488--174554
22
3.0
22
97
0
125
25
20
26
26
1.99
178908--178981
18
3.9
18
77
14
78
22
20
31
25
1.98
178902--178981
40
2.0
39
90
2
124
25
20
28
26
1.99

Tables:   1   2

The End!