Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006028.1 Hibiscus syriacus cultivar Beakdansim tig00014231_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  182679

Tables:   1   2   

This is table  2  of  2  ( 130 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
178317--178355
17
2.4
17
95
4
71
43
0
5
51
1.24
180340--180608
139
1.9
140
97
0
513
28
13
15
42
1.85
180579--180837
20
13.9
20
73
14
194
33
22
17
26
1.96
180579--180722
54
2.7
54
84
0
198
36
24
13
25
1.92
180695--180874
74
2.5
74
92
1
292
32
21
20
25
1.98
180735--180869
34
3.9
34
76
12
130
33
21
21
23
1.97
180587--180837
94
2.7
94
81
6
275
33
23
17
25
1.96
180874--180913
20
2.0
20
95
0
71
12
20
22
45
1.84
180874--180929
19
2.8
20
86
2
60
14
17
25
42
1.87
182506--182545
21
2.1
19
86
13
55
27
15
32
25
1.95

Tables:   1   2

The End!