Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000608.1 Hibiscus syriacus cultivar Beakdansim tig00001181_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86145

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4525--4593
32
2.2
32
84
2
86
31
1
34
31
1.67
34855--34980
47
2.8
45
85
5
164
29
23
7
39
1.83
35085--35244
40
4.1
40
92
3
279
33
25
17
23
1.96
35085--35244
78
2.0
80
93
2
279
33
25
17
23
1.96
44434--44497
8
8.0
8
80
13
78
82
10
6
0
0.82
44436--44497
15
3.9
15
78
17
72
83
9
6
0
0.79
44434--44497
33
1.9
33
87
6
94
82
10
6
0
0.82
44471--44508
20
1.9
20
88
0
58
78
10
7
2
1.04
57966--58126
40
4.1
40
95
1
297
33
26
16
23
1.95
57966--58126
79
2.0
80
96
1
297
33
26
16
23
1.95
67010--68042
543
1.9
543
99
0
2039
40
11
25
22
1.87
71814--71937
45
2.8
45
85
8
164
28
23
8
40
1.83
72043--72200
40
4.1
39
93
5
275
32
28
15
22
1.95
72043--72200
77
2.0
79
96
2
293
32
28
15
22
1.95
80151--80199
16
2.9
16
84
6
53
61
0
22
16
1.34
80400--80456
1
57.0
1
75
0
51
0
12
0
87
0.54
80400--80456
24
2.4
24
84
0
69
0
12
0
87
0.54
85139--85167
10
2.9
10
100
0
58
93
6
0
0
0.36

Tables:   1

The End!