Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006115.1 Hibiscus syriacus cultivar Beakdansim tig00014491_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61440

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1357--1415
23
2.6
23
91
0
91
18
25
28
27
1.98
2517--2547
16
1.9
16
100
0
62
12
16
25
45
1.83
2950--2976
6
4.5
6
100
0
54
55
0
0
44
0.99
5339--5415
36
2.1
37
85
4
102
44
1
1
53
1.17
11945--11986
17
2.5
17
96
0
75
28
14
23
33
1.94
12088--12151
31
2.1
31
91
2
103
42
4
20
32
1.73
12392--12447
23
2.4
22
77
11
58
17
25
25
32
1.97
13022--13077
19
2.9
19
91
0
94
28
12
33
25
1.92
13068--13109
20
2.1
20
95
0
75
28
19
26
26
1.98
13269--13314
21
2.2
21
88
0
65
41
8
0
50
1.33
13279--13326
21
2.3
21
100
0
96
35
8
0
56
1.30
15821--15869
19
2.7
17
84
9
53
26
20
28
24
1.99
15841--16050
65
3.2
64
83
7
246
25
19
25
29
1.98
16515--16555
2
20.5
2
100
0
82
51
0
0
48
1.00
20709--20743
15
2.3
15
95
0
61
5
22
8
62
1.45
22575--22614
21
1.9
21
90
10
64
32
10
5
52
1.56
24553--24764
65
3.2
65
78
12
209
27
18
22
31
1.97
24557--24755
68
3.0
66
80
16
200
26
18
23
31
1.97
29100--29163
31
2.1
31
91
2
103
40
4
21
32
1.74
35585--35660
18
3.8
18
71
24
62
18
18
32
30
1.95
59103--59141
21
1.9
20
84
5
51
46
2
5
46
1.38
60444--60471
14
2.0
14
100
0
56
21
42
28
7
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60458--60543
20
4.3
20
96
0
163
24
33
31
10
1.89
60438--60577
10
13.3
10
71
10
100
24
30
35
10
1.88
60659--60683
12
2.1
12
100
0
50
16
36
8
40
1.77
60701--60814
29
4.0
29
98
1
221
20
31
34
14
1.92

Tables:   1

The End!