Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006154.1 Hibiscus syriacus cultivar Beakdansim tig00014623_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  160070

Tables:   1   2   

This is table  2  of  2  ( 133 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
139119--139159
8
5.2
8
85
11
50
19
0
2
78
0.87
139114--139164
21
2.4
21
87
6
68
17
1
1
78
0.94
139069--139149
26
3.0
27
73
10
76
19
3
2
74
1.09
139305--139333
12
2.3
13
94
5
51
31
0
0
68
0.89
147593--147648
26
2.1
28
83
12
73
50
0
1
48
1.11
148204--148244
17
2.4
17
91
4
64
21
2
4
70
1.18
152904--152937
3
11.3
3
87
0
50
2
29
29
38
1.72
154961--155006
23
2.0
23
87
8
67
67
0
2
30
1.03
154974--155007
17
1.9
18
94
5
61
67
0
0
32
0.91
155012--155050
19
2.1
19
85
9
53
56
0
20
23
1.42
156018--156045
14
2.0
14
100
0
56
50
0
0
50
1.00
158119--158177
22
2.5
23
81
10
66
37
5
25
32
1.78
159902--159959
25
2.3
24
81
18
66
53
5
5
36
1.46

Tables:   1   2

The End!