Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006210.1 Hibiscus syriacus cultivar Beakdansim tig00014791_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62708

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
132--247
37
3.0
37
79
9
126
35
18
12
33
1.89
142--270
37
3.4
36
77
12
118
33
19
13
34
1.90
402--1000
66
9.2
64
78
9
482
28
17
13
41
1.86
409--1000
130
4.5
129
77
9
497
28
16
13
41
1.86
1004--1235
124
1.9
124
81
7
283
24
32
18
24
1.97
1483--1527
18
2.4
18
85
3
54
40
0
2
57
1.11
3222--3273
2
26.5
2
96
3
97
51
0
0
48
1.00
7896--7944
22
2.2
22
88
0
71
20
46
22
10
1.80
7911--7971
14
5.0
12
77
18
63
16
36
26
21
1.94
15142--15189
21
2.4
20
83
10
62
16
22
27
33
1.96
15142--15173
11
3.1
11
86
13
50
18
18
28
34
1.95
15143--15189
10
4.7
10
84
7
60
14
23
27
34
1.94
15200--15249
19
2.6
19
90
0
73
22
20
26
32
1.98
15247--15279
17
1.9
17
100
0
66
18
48
24
9
1.76
15279--15316
7
5.6
7
87
6
60
18
31
26
23
1.97
15279--15316
13
2.8
14
92
4
60
18
31
26
23
1.97
17995--18037
21
2.0
21
82
8
52
20
18
25
34
1.96
18682--18764
36
2.2
38
85
8
118
51
3
0
44
1.18
18682--18764
18
4.4
20
73
23
83
51
3
0
44
1.18
18803--18844
14
3.0
14
82
0
57
45
33
0
21
1.52
18982--19052
18
3.6
18
68
26
54
43
7
9
39
1.65
18959--19068
42
2.6
42
94
0
193
40
7
11
40
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19070--19110
2
20.0
2
95
5
73
48
0
2
48
1.14
19194--19267
7
10.6
7
75
5
60
43
33
0
22
1.54
19342--19382
21
2.0
21
90
0
64
36
14
12
36
1.84
21106--21436
102
3.3
101
89
2
504
22
9
17
50
1.75
23952--23987
17
2.1
17
89
0
54
11
19
25
44
1.83
24572--24618
14
3.7
14
71
26
50
51
4
0
44
1.21
24570--24619
23
2.1
24
96
3
93
48
4
0
48
1.20
24664--24695
9
3.4
9
95
4
55
37
0
0
62
0.95
24876--24925
16
3.1
16
91
0
82
42
14
20
24
1.88
24946--25026
32
2.5
31
78
9
92
16
19
30
33
1.94
29112--29182
23
3.1
23
78
8
81
39
22
18
19
1.92
29094--29191
46
2.1
47
82
1
117
39
20
19
20
1.92
29121--29191
23
3.1
23
81
0
88
36
19
22
21
1.95
32426--32527
34
3.0
34
100
0
204
29
26
17
26
1.98
35100--35139
20
2.0
20
100
0
80
25
25
15
35
1.94
39958--40003
3
16.0
3
86
8
51
60
6
0
32
1.22
40111--40157
22
2.1
22
88
7
69
51
0
12
36
1.40
53531--53641
47
2.3
48
93
1
188
22
18
22
36
1.95
53531--53641
24
4.7
24
94
2
188
22
18
22
36
1.95
57427--57457
16
2.0
16
93
6
55
32
9
19
38
1.84
60936--60973
10
3.7
11
89
10
55
44
0
0
55
0.99
60936--60969
2
17.5
2
93
6
61
47
0
0
52
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60966--61016
23
2.2
23
82
6
59
25
1
5
66
1.24
61062--61119
2
29.5
2
89
3
91
48
1
1
48
1.22
62417--62446
11
2.9
10
90
9
51
20
0
0
80
0.72

Tables:   1

The End!