Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006294.1 Hibiscus syriacus cultivar Beakdansim tig00015046_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55434

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69--95
2
13.5
2
100
0
54
48
0
0
51
1.00
9422--9507
26
3.2
25
70
15
66
19
23
6
50
1.72
15119--15176
3
19.0
3
79
10
64
37
1
0
60
1.07
15119--15182
15
4.1
16
84
8
87
39
1
0
59
1.07
15177--15210
2
17.0
2
100
0
68
50
0
0
50
1.00
16584--16630
20
2.3
21
75
10
53
25
4
8
61
1.43
17314--17381
18
3.5
18
73
21
57
27
5
4
61
1.38
19691--19731
7
5.9
7
83
11
57
14
17
9
58
1.62
23885--24202
114
2.8
114
94
0
546
32
15
20
31
1.94
26788--26842
22
2.5
22
90
0
92
36
10
12
40
1.79
27289--27932
76
8.5
76
97
1
1209
22
20
21
36
1.95
27289--27929
229
2.8
228
98
0
1221
21
20
21
36
1.95
28060--28111
3
17.0
3
76
11
52
38
1
0
59
1.08
28064--28119
25
2.1
27
83
9
71
41
1
0
57
1.09
29509--29555
20
2.3
21
75
10
53
25
4
8
61
1.43
33576--33612
18
2.1
18
89
0
56
13
5
0
81
0.86
33582--33620
20
1.9
21
94
5
71
12
7
0
79
0.93
35785--35811
2
13.5
2
100
0
54
48
0
0
51
1.00
52951--53010
22
2.7
23
76
5
59
56
10
5
28
1.53
55253--55316
26
2.5
26
82
9
71
20
45
20
14
1.85

Tables:   1

The End!