Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006357.1 Hibiscus syriacus cultivar Beakdansim tig00015237_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  97092

Tables:   1   

This is table  1  of  1  ( 46 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2368--2405
19
2.0
19
89
0
58
52
0
0
47
1.00
4762--4803
14
3.0
14
85
0
57
28
30
14
26
1.95
11459--11547
2
45.0
2
97
2
171
50
0
0
49
1.00
11592--11629
15
2.4
16
86
4
60
60
2
0
36
1.11
11783--11816
11
3.1
11
86
0
50
61
2
0
35
1.11
11875--11924
25
2.0
25
96
0
91
18
24
14
44
1.86
13465--13520
21
2.7
21
88
0
76
33
41
7
17
1.77
15532--15569
20
1.9
20
88
0
58
21
26
10
42
1.85
15762--15865
33
3.3
33
63
20
87
35
10
18
35
1.85
15748--15927
60
3.0
60
94
0
299
34
15
14
35
1.88
17603--17658
2
28.5
2
89
3
87
46
0
1
51
1.11
24161--24331
20
7.7
20
69
23
92
21
24
9
44
1.82
24149--24481
46
7.2
46
88
0
495
22
21
9
46
1.79
24182--24481
20
13.0
25
67
22
102
22
22
9
46
1.79
24883--24935
22
2.5
20
80
11
61
26
26
15
32
1.95
30278--30348
20
3.4
22
67
16
60
43
0
1
54
1.08
33338--33401
3
20.7
3
84
6
83
60
0
0
39
0.97
33534--34397
76
11.5
76
95
1
1526
34
21
19
23
1.96
34338--34703
182
2.0
183
95
0
653
37
14
15
31
1.88
35252--35306
22
2.5
22
93
0
101
40
14
10
34
1.81
43959--44013
15
3.5
16
81
16
62
72
0
1
25
0.94
43959--44017
25
2.4
25
82
0
73
72
0
1
25
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43965--44017
18
3.0
18
73
21
58
73
0
1
24
0.93
45063--45087
13
1.9
13
100
0
50
56
16
12
16
1.68
46013--46062
3
16.0
3
87
8
73
64
0
0
36
0.94
47526--47657
60
2.2
60
82
9
155
31
15
17
34
1.92
49673--49712
15
2.7
15
84
7
55
62
5
0
32
1.17
52764--52811
3
15.3
3
82
8
60
33
2
0
64
1.05
52755--52811
23
2.5
23
86
8
73
31
3
0
64
1.10
52769--52811
13
3.4
13
87
12
63
32
0
0
67
0.91
65822--65873
22
2.3
22
90
9
79
80
9
0
9
0.90
65841--65880
15
2.6
15
80
4
53
82
7
2
7
0.92
65837--65886
26
2.0
25
92
4
82
80
8
2
10
0.99
65822--65864
11
4.0
11
96
3
79
81
9
0
9
0.88
65822--65884
24
2.9
21
81
13
65
82
7
1
7
0.90
67057--67177
43
3.0
40
70
12
111
25
33
17
23
1.96
67332--67379
3
15.3
3
82
8
60
33
2
0
64
1.05
67323--67379
23
2.5
23
86
8
73
31
3
0
64
1.10
67337--67379
13
3.4
13
87
12
63
32
0
0
67
0.91
73078--73191
32
3.6
32
82
0
138
37
14
13
35
1.84
74717--74743
13
2.1
13
100
0
54
18
44
22
14
1.86
84179--84203
13
1.9
13
100
0
50
64
0
28
8
1.22
88651--88712
19
3.5
17
75
16
63
53
1
8
37
1.40
95990--96046
18
2.9
18
82
10
60
26
31
22
19
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96009--96084
21
3.5
22
87
7
120
28
28
27
14
1.95
95991--96084
42
2.3
40
87
7
127
28
29
25
15
1.96

Tables:   1

The End!