Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006385.1 Hibiscus syriacus cultivar Beakdansim tig00015374_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  216924

Tables:   1   2   

This is table  2  of  2  ( 130 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
209662--209774
32
3.5
33
89
3
185
46
21
23
8
1.79
209791--209843
14
3.5
14
72
18
52
7
26
24
41
1.81
209775--209854
32
2.5
33
91
2
126
7
23
22
46
1.77
209830--209907
41
1.9
41
94
0
138
11
26
16
44
1.82
209831--209906
21
3.7
21
82
3
100
10
26
17
46
1.80
209986--210056
33
2.2
33
89
0
106
47
16
23
11
1.79
210436--210628
20
9.6
20
83
4
228
19
19
25
35
1.95
210436--210646
60
3.5
60
82
2
253
18
19
25
35
1.95
210576--210646
20
3.5
20
92
3
108
12
19
25
42
1.87
214527--214563
14
2.6
14
91
0
56
40
2
2
54
1.29

Tables:   1   2

The End!