Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006431.1 Hibiscus syriacus cultivar Beakdansim tig00015525_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39017

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1358--1406
13
3.8
13
94
0
80
16
46
18
18
1.84
1384--1419
18
2.0
18
100
0
72
16
50
22
11
1.77
2710--2744
18
1.9
18
88
0
52
54
0
17
28
1.43
11914--11964
27
1.9
26
96
4
93
84
7
0
7
0.78
11913--11955
20
2.2
19
88
12
61
83
6
0
9
0.80
12166--12198
16
2.1
16
94
0
57
54
9
18
18
1.69
12195--12329
36
3.8
36
89
3
209
18
21
20
39
1.93
12195--12340
72
2.0
72
94
0
256
17
21
19
40
1.91
14674--14710
4
9.2
4
87
0
56
24
2
24
48
1.64
15964--15988
2
12.5
2
100
0
50
52
0
0
48
1.00
16524--16685
60
2.7
59
80
7
157
35
19
3
40
1.70
16573--16706
60
2.2
60
88
5
191
33
23
5
38
1.77
17248--17387
75
1.9
75
86
3
201
32
19
2
45
1.65
17721--17842
60
2.0
60
82
6
149
43
2
19
34
1.65
23863--24429
4
142.8
4
98
1
1097
49
24
0
25
1.50
25585--25627
20
2.2
20
83
8
52
16
16
11
55
1.68
28883--28920
20
2.0
20
89
5
60
71
13
2
13
1.26
31133--31177
22
2.0
22
86
0
63
13
15
13
57
1.65
31644--31682
18
2.2
18
85
0
51
48
0
0
51
1.00
31852--32456
36
16.1
37
75
10
498
22
18
23
35
1.96
31927--32547
114
5.5
114
83
7
721
22
19
23
34
1.96

Tables:   1

The End!