Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006575.1 Hibiscus syriacus cultivar Beakdansim tig00016108_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  157965

Tables:   1   2   

This is table  2  of  2  ( 136 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
131262--131300
14
2.8
14
88
0
60
51
23
0
25
1.49
131256--131308
14
3.8
14
79
0
52
50
28
0
20
1.48
131473--131507
2
17.0
2
88
5
52
45
0
5
48
1.26
131612--131669
16
3.8
16
72
17
52
39
5
5
50
1.47
131581--131759
87
2.0
88
86
5
247
41
4
4
49
1.43
131676--131771
31
3.0
31
83
7
104
45
3
3
47
1.34
131750--131790
21
2.0
20
86
13
57
53
0
0
46
1.00
131608--131796
87
2.1
87
82
7
222
43
3
3
49
1.36
140138--140775
336
1.9
336
94
0
1134
36
12
13
36
1.83
144096--144152
9
6.6
9
75
18
50
31
7
0
61
1.23
144175--144208
12
2.8
12
86
0
50
32
0
0
67
0.91
149651--149760
47
2.4
46
86
4
143
40
9
20
30
1.83
157436--157471
11
3.5
11
85
14
58
83
11
5
0
0.80
157434--157471
20
1.9
20
100
0
76
84
10
5
0
0.77
157508--157553
18
2.4
19
89
7
67
80
0
19
0
0.71
157508--157553
20
2.3
19
88
7
65
80
0
19
0
0.71

Tables:   1   2

The End!