Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006703.1 Hibiscus syriacus cultivar Beakdansim tig00016693_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66283

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1122--1151
14
2.1
14
100
0
60
0
0
30
70
0.88
6028--6101
7
9.2
8
75
19
50
58
0
0
41
0.98
6016--6097
33
2.5
33
96
2
148
57
0
0
42
0.98
8486--8553
2
35.0
2
91
5
113
52
0
0
47
1.00
13233--13262
9
3.3
9
100
0
60
13
23
20
43
1.86
14618--14797
43
4.3
42
77
8
134
22
16
23
37
1.93
15208--15260
21
2.5
21
78
0
61
0
35
20
43
1.52
22396--22490
42
2.3
42
83
5
104
28
24
17
29
1.97
22410--22572
42
3.9
42
82
10
183
25
25
18
30
1.98
22410--22572
83
2.0
84
82
6
206
25
25
18
30
1.98
22434--22778
41
8.3
42
70
14
198
27
23
17
31
1.97
22344--22813
248
1.9
246
84
6
628
28
22
17
31
1.96
22452--22921
206
2.3
206
86
1
654
27
22
18
31
1.97
24183--24207
2
12.5
2
100
0
50
52
0
0
48
1.00
39746--39781
18
2.0
18
88
0
54
13
25
13
47
1.80
49583--49703
31
3.8
32
75
7
113
33
21
16
28
1.95
53238--53300
22
2.9
22
79
9
76
14
23
38
23
1.92
59727--59778
3
18.0
3
92
7
90
32
0
0
67
0.91
63588--63612
12
2.1
12
100
0
50
32
24
0
44
1.54

Tables:   1

The End!