Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006709.1 Hibiscus syriacus cultivar Beakdansim tig00016723_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51896

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3821--3879
30
2.0
30
83
12
77
37
8
18
35
1.81
5090--5157
24
2.8
24
95
0
118
33
10
13
42
1.78
10354--10404
24
2.1
24
85
0
66
37
11
17
33
1.86
12343--12396
20
2.7
20
94
0
90
37
11
5
46
1.63
16551--16694
50
2.9
50
90
2
227
35
25
18
20
1.95
19529--19612
35
2.4
35
86
4
107
38
2
35
23
1.68
19532--19640
35
3.1
35
82
5
105
36
2
34
25
1.71
20386--20431
23
2.0
23
83
8
58
36
6
8
47
1.60
22043--22119
26
3.0
25
76
14
75
75
2
16
5
1.10
22049--22105
13
4.4
13
75
20
57
78
1
15
3
0.96
24995--25040
23
2.0
23
83
8
58
36
6
8
47
1.60
26649--26724
17
4.4
18
75
18
72
76
3
14
5
1.11
26667--26708
10
4.2
10
81
0
57
85
2
9
2
0.77
29601--29646
23
2.0
23
83
8
58
36
6
8
47
1.60
33292--33342
19
2.6
20
87
3
68
45
5
15
33
1.71
35362--35440
35
2.3
35
88
0
122
32
1
36
29
1.66
35419--35447
13
2.1
14
93
6
51
31
3
41
24
1.71
39880--39916
16
2.3
16
90
0
56
64
5
10
18
1.43
43564--43596
17
1.9
17
93
0
57
42
0
27
30
1.56
45638--50259
901
5.0
902
72
15
4125
32
17
15
34
1.92
48478--50259
899
2.0
902
98
0
3444
32
17
15
34
1.91

Tables:   1

The End!