Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006790.1 Hibiscus syriacus cultivar Beakdansim tig00017219_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79031

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2434--2528
42
2.3
41
79
1
109
24
24
22
29
1.99
7855--7891
2
18.5
2
89
10
58
48
0
2
48
1.15
7949--7989
2
20.5
2
100
0
82
51
0
0
48
1.00
8009--8174
85
2.0
85
82
7
203
30
17
20
31
1.96
8151--8184
13
2.6
13
95
0
59
32
23
20
23
1.98
15589--15720
60
2.2
60
86
0
183
26
20
18
34
1.96
18066--18109
14
3.1
14
83
6
54
38
2
2
56
1.24
18594--18648
22
2.4
23
90
6
94
12
23
14
49
1.78
18962--19010
25
2.0
24
84
4
62
16
10
16
57
1.65
19886--20497
59
10.4
59
93
0
1019
33
18
15
32
1.92
22831--23465
59
10.8
59
94
0
984
31
21
13
33
1.92
23890--23935
22
2.2
20
84
7
56
28
23
15
32
1.95
23843--24023
100
1.8
100
88
7
278
25
25
15
33
1.95
25086--25139
20
2.7
20
91
0
81
31
22
22
24
1.98
26710--26740
15
2.1
15
93
0
53
67
3
22
6
1.28
51628--51696
30
2.3
31
84
5
95
24
7
37
30
1.83
63804--63862
25
2.4
25
94
2
102
44
10
3
42
1.55
66445--66497
18
2.9
18
85
0
79
28
28
22
20
1.99
73465--73504
17
2.3
18
91
4
64
20
45
20
15
1.86
76342--76461
31
3.9
31
71
12
86
20
28
25
25
1.99
78620--78655
17
2.2
17
90
5
56
44
19
5
30
1.73

Tables:   1

The End!