Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006802.1 Hibiscus syriacus cultivar Beakdansim tig00017265_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79231

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4295--4374
36
2.3
35
81
14
101
37
2
16
43
1.61
8731--8813
37
2.2
37
87
4
114
34
4
18
42
1.71
30134--30161
2
14.0
2
100
0
56
50
0
0
50
1.00
32629--32951
93
3.5
92
87
3
434
41
15
7
36
1.75
32816--33125
170
1.8
167
88
3
469
40
16
8
34
1.78
36031--36089
24
2.5
24
91
0
91
44
20
18
16
1.87
38486--38545
23
2.6
23
86
5
86
30
20
25
25
1.99
40686--40779
28
3.4
28
78
13
95
46
12
14
25
1.80
40702--40769
25
2.5
27
83
9
86
50
11
11
26
1.73
42517--42576
26
2.2
26
82
8
66
1
15
10
73
1.17
42554--42594
14
2.9
14
85
7
55
2
12
7
78
1.06
44546--44626
32
2.5
32
97
0
153
34
24
9
30
1.88
50176--50303
33
3.9
33
82
4
159
33
21
24
20
1.97
51495--51806
153
2.0
153
95
0
561
37
16
19
26
1.93
60281--60316
13
2.8
13
88
12
56
55
0
2
41
1.14
64157--64213
30
1.9
30
92
0
96
40
3
21
35
1.70
65706--65803
38
2.6
38
80
1
117
42
15
10
31
1.80
66284--66377
21
4.3
21
69
19
66
35
3
1
60
1.20
66337--66394
23
2.5
23
75
5
55
32
5
0
62
1.18
66511--66590
27
2.8
29
75
17
80
25
1
6
67
1.21
66570--66620
18
2.6
19
79
11
59
29
3
3
62
1.31
66657--66698
4
10.2
4
89
5
57
19
2
0
78
0.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66663--66744
8
10.0
8
74
12
60
15
6
0
78
0.95
66668--66727
12
4.9
12
79
4
57
15
5
0
80
0.88
66717--66745
9
3.3
9
90
9
51
10
13
0
75
1.04
71081--71136
9
6.9
9
82
17
52
78
7
14
0
0.95
71082--71143
23
2.7
22
85
9
79
80
4
14
0
0.87
71076--71163
32
2.7
31
81
13
88
79
6
12
1
0.98
71083--71151
18
3.9
18
68
24
58
79
5
14
0
0.90
71112--71151
9
4.4
9
84
9
55
80
7
12
0
0.91
71077--71151
28
2.7
29
82
12
77
80
6
13
0
0.91
71773--71837
22
3.0
22
97
0
121
38
27
12
21
1.89
72247--72283
18
2.0
19
94
5
67
18
5
32
43
1.73
72651--74127
106
14.0
106
90
1
2186
33
24
18
23
1.97
74833--74937
37
2.8
37
86
0
147
40
15
14
30
1.87
75642--75703
25
2.4
25
79
20
65
20
0
6
72
1.06
75758--75809
2
26.5
2
96
3
97
48
0
0
51
1.00
75819--75869
19
2.9
17
75
13
50
13
5
0
80
0.89
75819--75871
12
4.7
10
77
22
52
13
5
0
81
0.86
75819--75881
30
2.1
30
82
11
76
14
6
0
79
0.92
78068--78101
16
2.1
16
94
0
59
47
17
17
17
1.84
78100--78170
32
2.3
32
85
4
101
36
18
19
25
1.94

Tables:   1

The End!