Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006806.1 Hibiscus syriacus cultivar Beakdansim tig00017274_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50420

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
940--974
17
2.1
17
88
0
52
40
0
0
60
0.97
2474--2517
18
2.3
18
84
7
52
36
15
18
29
1.92
3321--3394
26
2.9
23
77
18
67
62
5
4
28
1.36
7132--7291
80
2.0
80
88
9
240
33
13
15
38
1.85
16575--16666
29
3.2
29
71
22
104
32
29
9
28
1.89
16569--16650
28
3.0
27
70
24
80
32
29
8
29
1.87
16569--16674
56
1.9
56
100
0
212
33
27
9
30
1.88
18528--18579
11
4.5
11
76
7
50
19
11
15
53
1.71
36306--36383
2
39.0
2
97
0
147
48
0
1
50
1.09
36394--36471
39
2.0
38
83
11
97
21
10
1
66
1.29
36455--36726
138
2.0
136
92
0
402
25
11
4
58
1.51
47355--47445
46
1.9
48
86
4
132
42
15
26
15
1.86
48193--48967
105
7.4
105
93
1
1250
33
25
17
23
1.96
48200--48966
209
3.7
210
93
1
1261
33
25
17
23
1.96
48193--48967
314
2.5
314
93
1
1275
33
25
17
23
1.96

Tables:   1

The End!