Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006811.1 Hibiscus syriacus cultivar Beakdansim tig00017287_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65351

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1896--2354
232
2.0
232
93
0
792
26
18
18
36
1.94
2551--2579
10
2.9
10
100
0
58
68
0
0
31
0.89
2824--2859
2
18.5
2
94
5
65
52
0
0
47
1.00
3439--3489
14
3.7
14
75
15
52
31
33
15
19
1.93
3435--3487
27
2.0
27
88
0
79
33
33
15
16
1.90
3501--3542
14
2.9
15
79
13
61
23
14
21
40
1.90
19745--19784
14
3.1
14
89
10
59
77
15
7
0
0.98
19734--19774
11
3.7
11
93
0
64
82
12
4
0
0.81
38014--38052
20
2.0
20
85
10
53
28
7
10
53
1.62
39657--39858
95
2.1
96
85
3
266
28
15
26
29
1.96
39826--39867
20
2.0
22
86
9
61
35
11
26
26
1.91
40267--40576
47
6.6
47
90
3
473
42
10
24
22
1.85
40300--40481
27
7.5
26
66
23
112
42
12
25
20
1.86
46534--46571
20
1.9
20
88
0
58
39
13
23
23
1.90
46954--47327
47
8.0
47
90
1
563
42
11
23
22
1.86
46954--47302
20
14.8
25
64
27
142
43
11
22
22
1.85
51855--51917
29
2.1
30
85
2
83
33
17
7
41
1.79
54080--54226
2
72.0
2
81
9
127
50
5
0
43
1.30
59135--59173
20
2.0
20
89
0
60
33
23
10
33
1.88
65039--65091
21
2.6
21
79
11
56
16
26
1
54
1.53

Tables:   1

The End!