Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006873.1 Hibiscus syriacus cultivar Beakdansim tig00017503_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67118

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7943--8034
42
2.2
42
92
5
159
18
13
16
52
1.75
8055--8333
139
2.0
139
97
0
522
32
15
11
40
1.82
8370--8432
24
2.6
24
78
19
60
49
1
1
47
1.20
8404--8447
22
2.0
23
86
4
63
40
2
2
54
1.25
8487--8591
30
3.6
29
81
11
110
46
0
0
51
1.13
8497--8591
19
5.0
18
70
11
57
49
1
1
48
1.15
8586--8630
23
2.0
23
86
0
63
53
2
2
42
1.25
8734--8809
23
3.0
26
74
18
79
51
0
1
47
1.09
8747--8806
22
2.7
22
77
12
59
53
0
1
45
1.10
8734--8808
25
3.0
25
79
15
75
52
0
1
46
1.09
8977--9025
14
3.4
14
75
5
53
36
12
6
44
1.67
8982--9029
15
3.3
15
72
16
55
35
12
6
45
1.67
11082--11128
3
15.7
3
90
0
76
38
0
0
61
0.96
11377--11862
145
3.5
142
78
6
463
33
22
23
20
1.97
12008--12084
29
2.6
30
84
10
88
22
11
5
61
1.50
12016--12084
30
2.3
29
83
11
79
21
10
4
63
1.42
16657--16713
28
2.0
28
96
0
105
7
59
19
14
1.57
18805--18862
2
29.0
2
100
0
116
50
0
0
50
1.00
23712--23752
21
2.0
21
85
0
55
31
31
21
14
1.94
23777--23825
22
2.2
22
82
7
64
32
30
28
8
1.86
25287--25607
103
3.1
103
97
0
606
25
12
23
37
1.90
25623--25683
23
2.7
23
84
0
86
21
26
26
26
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27316--27428
3
38.0
3
89
1
156
37
1
0
61
1.07
40180--40278
9
10.9
9
73
20
73
81
0
17
1
0.74
40198--40277
1
80.0
1
72
0
52
85
0
13
1
0.67
40183--40278
21
4.7
20
80
15
108
82
0
16
1
0.73
40192--40278
25
3.7
22
81
15
104
82
0
16
1
0.72
40180--40277
17
5.9
16
76
20
87
82
0
16
1
0.72
40183--40277
31
3.1
30
81
13
104
83
0
15
1
0.71
41428--41744
52
6.1
52
96
0
564
25
15
23
36
1.94
41686--41890
83
2.5
83
95
0
356
29
13
20
36
1.91
42440--43218
113
6.8
113
93
1
1166
37
13
19
29
1.90
43470--43582
3
38.0
3
90
1
183
34
1
0
63
1.05
53088--53314
113
2.0
113
99
0
445
36
12
22
27
1.91
57482--57638
65
2.4
65
87
2
208
29
20
17
31
1.96
65119--65274
65
2.4
64
86
5
215
28
21
19
30
1.98
66151--66241
31
3.0
31
96
3
168
32
6
17
42
1.75
66439--66480
21
2.0
21
95
0
75
23
21
28
26
1.99
66759--66827
33
2.1
32
86
2
93
30
15
30
23
1.96

Tables:   1

The End!