Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006902.1 Hibiscus syriacus cultivar Beakdansim tig00017627_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  195944

Tables:   1   2   

This is table  2  of  2  ( 135 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
165237--165318
26
3.1
26
70
15
69
23
8
14
53
1.68
165727--165858
59
2.2
61
80
9
155
34
15
16
33
1.91
167522--167563
2
20.5
2
95
4
75
47
2
0
50
1.14
171066--171142
25
3.2
25
62
20
63
31
18
11
38
1.86
171048--171152
48
2.2
48
96
1
192
33
20
12
34
1.90
172059--172100
21
2.0
21
90
4
66
35
23
21
19
1.96
172087--172155
23
3.0
23
78
0
84
34
24
24
15
1.95
173198--173266
23
3.0
23
75
8
77
15
24
24
34
1.95
180017--180177
65
2.5
65
86
1
216
30
14
22
31
1.94
180188--180225
20
1.9
20
88
0
58
23
15
28
31
1.96
182844--182925
23
3.6
22
78
8
94
24
24
26
24
2.00
182848--182944
44
2.2
44
83
10
119
25
21
25
26
2.00
188580--188735
64
2.5
63
85
8
212
27
17
23
31
1.97
188747--188784
20
1.9
20
88
0
58
18
13
36
31
1.89
192676--192723
22
2.2
21
77
3
51
27
4
4
64
1.30

Tables:   1   2

The End!