Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007027.1 Hibiscus syriacus cultivar Beakdansim tig00018191_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  263012

Tables:   1   2   

This is table  2  of  2  ( 148 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
211176--211235
19
3.4
19
71
21
67
45
21
23
10
1.82
211242--211321
33
2.4
32
85
8
99
10
27
22
40
1.86
211288--211342
20
2.7
21
82
2
67
12
27
18
41
1.86
211420--211490
33
2.2
33
92
0
115
47
18
22
11
1.80
211668--211722
22
2.5
22
81
0
74
20
16
40
23
1.91
211865--212058
20
9.6
20
82
5
221
19
19
25
35
1.95
211865--212058
60
3.2
60
83
0
253
19
19
25
35
1.95
212051--212127
21
3.7
20
70
13
57
27
16
23
32
1.96
212113--212164
20
2.6
20
96
0
95
21
13
26
38
1.90
212722--212776
22
2.4
23
81
6
67
45
1
3
49
1.30
212774--212815
22
1.9
22
90
0
66
33
7
4
54
1.49
216655--216695
3
13.7
3
94
0
73
70
0
0
29
0.87
218177--219466
106
12.3
106
94
3
2222
23
17
25
33
1.96
218991--219146
43
3.4
43
69
13
141
21
18
25
34
1.96
218225--219466
412
3.0
414
95
2
2185
22
17
25
34
1.96
224066--224103
3
12.7
3
100
0
76
68
0
0
31
0.90
224966--225000
2
18.0
2
88
5
54
48
0
2
48
1.16
227129--227194
29
2.3
29
100
0
132
12
34
19
33
1.89
228403--229119
245
2.9
247
86
3
919
24
27
13
33
1.93
241627--241662
2
18.0
2
94
0
63
0
52
0
47
1.00
245412--245454
21
2.0
22
81
9
52
51
4
0
44
1.22
245485--245567
37
2.3
37
83
4
98
45
2
0
51
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
245526--245593
26
2.6
26
75
6
66
47
1
0
51
1.09
252533--252584
27
2.0
26
85
7
70
46
9
11
32
1.73
259312--259351
21
1.9
21
84
0
53
40
5
2
52
1.37
259810--259950
61
2.3
60
89
3
212
12
11
17
59
1.60
261696--261729
10
3.4
10
95
0
59
5
41
2
50
1.42
262777--262812
10
3.7
10
92
3
56
8
11
0
80
0.90

Tables:   1   2

The End!