Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007072.1 Hibiscus syriacus cultivar Beakdansim tig00018415_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  290543

Tables:   1   2   

This is table  2  of  2  ( 137 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
244763--245072
83
3.7
83
90
5
489
26
13
23
36
1.92
245845--245889
24
1.9
23
82
13
56
51
6
24
17
1.70
245959--246003
24
1.9
23
82
13
56
51
6
24
17
1.70
245796--246262
114
4.1
114
95
1
755
38
13
17
31
1.88
245796--246262
227
2.1
228
91
2
762
38
13
17
31
1.88
246576--246656
3
27.3
3
88
7
121
35
0
0
64
0.94
246565--246655
15
5.3
17
80
19
93
36
0
0
63
0.94
246654--246687
2
17.0
2
100
0
68
50
0
0
50
1.00
246787--246829
16
2.8
16
96
3
79
6
58
18
16
1.60
248138--248182
24
2.0
22
82
8
54
40
0
0
60
0.97
250483--250599
37
3.1
37
97
1
216
46
2
8
42
1.48
251818--252009
97
2.0
95
86
4
269
19
20
14
45
1.85
261939--261997
29
2.0
29
96
0
109
32
25
5
37
1.78
262898--262928
16
1.9
16
100
0
62
25
6
16
51
1.68
266732--266914
59
3.1
60
86
2
262
27
17
9
45
1.79
283134--283178
22
2.0
22
100
0
90
42
17
31
8
1.80
287230--287573
180
1.9
180
80
4
399
31
17
24
25
1.97

Tables:   1   2

The End!