Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007084.1 Hibiscus syriacus cultivar Beakdansim tig00018483_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  192361

Tables:   1   2   

This is table  2  of  2  ( 131 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
168790--168868
23
3.6
22
77
5
97
25
22
25
26
2.00
171407--171441
12
2.9
12
91
0
52
40
14
5
40
1.69
175069--175109
20
2.0
22
90
9
68
39
0
0
60
0.96
175170--175209
18
2.2
18
86
8
55
70
5
0
25
1.08
175757--175857
31
3.4
29
80
6
114
35
12
13
37
1.84
176526--176595
33
2.2
33
86
2
97
41
14
11
32
1.81
177942--178301
188
1.9
188
87
0
522
22
9
17
50
1.74
183739--183790
26
2.0
27
81
11
63
32
9
1
55
1.43
186569--186634
33
2.0
33
93
0
114
28
10
13
46
1.76
190004--190084
18
4.3
18
79
11
90
30
28
22
18
1.97
190012--190053
22
1.9
22
90
0
66
35
26
16
21
1.94

Tables:   1   2

The End!