Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007097.1 Hibiscus syriacus cultivar Beakdansim tig00018545_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  272671

Tables:   1   2   

This is table  2  of  2  ( 135 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
225153--225180
3
9.3
3
100
0
56
32
0
0
67
0.91
227094--227159
2
33.0
2
96
0
123
48
0
1
50
1.10
228038--228092
28
1.9
29
85
3
76
32
3
12
50
1.58
230243--230284
15
2.9
14
86
10
57
40
0
4
54
1.21
231089--231131
20
2.2
20
100
0
86
32
0
9
58
1.30
244339--244411
36
2.0
36
89
7
112
31
5
15
47
1.67
249422--249479
18
3.2
18
65
26
50
29
12
18
39
1.87
251350--251830
117
4.1
114
77
7
364
26
20
13
40
1.89
251307--251815
116
4.4
115
78
7
455
26
19
13
40
1.89
251525--251872
117
3.0
117
80
4
294
25
19
13
41
1.88
254159--254212
16
3.2
17
78
19
60
3
20
0
75
0.95
255967--256180
94
2.3
94
82
6
238
32
16
17
34
1.92
261062--261106
20
2.2
20
84
0
63
37
20
20
22
1.94
262665--262705
21
2.0
20
85
4
55
63
2
31
2
1.20
270305--270339
15
2.3
15
95
0
61
11
28
11
48
1.74

Tables:   1   2

The End!