Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007188.1 Hibiscus syriacus cultivar Beakdansim tig00018934_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  283786

Tables:   1   2   

This is table  2  of  2  ( 136 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
247363--247396
18
1.9
18
94
5
61
38
11
11
38
1.79
247490--247521
16
2.0
17
88
11
50
43
21
21
12
1.86
256718--256758
18
2.3
18
86
0
55
2
29
21
46
1.64
258332--258415
23
3.8
22
82
6
89
20
27
29
22
1.98
262185--262224
21
1.9
21
89
0
62
30
7
7
55
1.56
263654--263692
21
2.0
20
90
10
62
12
23
41
23
1.88
264290--264347
24
2.4
24
82
8
64
18
12
20
48
1.80
264441--264495
24
2.2
24
81
9
58
20
12
20
47
1.82
264489--264597
48
2.3
48
76
6
112
24
20
15
39
1.91
264506--264771
48
5.5
48
68
10
148
21
19
17
41
1.90
267515--267578
24
2.7
24
92
0
101
39
17
20
23
1.92
271661--271704
22
2.0
22
82
8
54
54
15
4
25
1.60
273277--273664
184
2.1
184
90
3
604
42
3
8
45
1.52
274970--275051
3
27.3
3
92
0
128
37
1
0
60
1.04
274960--275051
12
7.8
11
78
19
89
38
1
1
59
1.12
275178--275218
16
2.6
16
88
11
66
7
58
17
17
1.60

Tables:   1   2

The End!