Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007250.1 Hibiscus syriacus cultivar Beakdansim tig00019207_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63004

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1394--1446
20
2.5
21
79
14
56
60
0
22
16
1.36
4774--4799
3
8.7
3
100
0
52
0
30
0
69
0.89
8933--8992
2
30.0
2
100
0
120
50
0
0
50
1.00
11140--11173
6
5.7
6
100
0
68
47
17
0
35
1.48
16991--17102
57
2.0
57
96
0
206
21
22
24
32
1.98
20634--20736
30
3.4
30
94
0
188
19
15
16
48
1.81
23545--23571
13
2.1
13
100
0
54
37
14
25
22
1.93
24150--24209
31
1.9
31
82
0
75
40
10
13
36
1.78
31330--31422
20
4.4
20
74
12
71
33
16
22
27
1.95
38011--38052
19
2.2
20
86
4
59
57
7
2
33
1.39
39781--39845
13
5.0
13
81
7
78
26
20
16
36
1.93
45243--45318
40
1.9
40
100
0
152
22
15
18
43
1.88
46446--46747
6
51.7
6
81
8
104
50
0
49
0
1.00
46430--46747
46
6.9
47
84
9
417
50
0
49
0
1.00
46430--46752
69
4.7
70
85
10
418
51
0
48
0
1.03
55399--55653
131
1.9
131
84
1
332
42
14
10
31
1.81
56125--56152
5
5.6
5
100
0
56
82
0
0
17
0.68
57646--57675
3
9.7
3
92
7
51
66
0
0
33
0.92
57872--58358
133
3.6
133
79
5
482
33
16
19
29
1.94
59674--59709
12
3.2
12
92
7
58
11
8
0
80
0.90

Tables:   1

The End!