Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007290.1 Hibiscus syriacus cultivar Beakdansim tig00019368_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63757

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8706--8761
26
2.1
25
76
20
60
44
12
0
42
1.42
9050--9112
20
3.2
19
76
17
65
69
0
6
23
1.11
14009--14897
177
5.0
177
93
1
1471
29
18
17
34
1.94
15254--15307
5
11.0
5
92
4
74
24
0
0
75
0.80
15398--15422
2
12.5
2
100
0
50
48
0
0
52
1.00
18880--18919
21
1.9
21
85
10
55
12
30
40
17
1.86
25522--25574
22
2.5
22
82
11
65
56
3
1
37
1.28
25781--25953
57
3.0
57
92
1
294
27
10
24
36
1.89
26130--26168
16
2.5
16
87
4
53
38
23
2
35
1.68
36656--36680
2
12.5
2
100
0
50
48
0
0
52
1.00
36799--36833
7
4.6
8
86
13
56
51
0
8
40
1.33
36798--36840
22
2.0
21
90
4
68
51
0
9
39
1.34
36799--36833
15
2.3
15
90
9
54
51
0
8
40
1.33
36802--36849
22
2.2
22
81
7
53
52
0
10
37
1.36
37119--37181
29
2.2
29
88
5
92
53
3
3
39
1.33
37092--37193
22
4.9
21
80
12
111
53
3
3
38
1.38
37164--37268
12
8.5
12
68
14
61
47
6
8
37
1.60
37091--37283
14
14.3
14
66
21
83
50
5
6
37
1.50
37685--37734
23
2.1
24
82
17
61
44
0
2
54
1.11
39036--39092
21
2.7
21
97
0
105
26
26
28
19
1.99
39288--39342
13
4.2
13
75
13
58
49
12
3
34
1.59
39328--39426
33
3.0
33
94
1
164
45
15
7
32
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39421--39462
21
2.0
21
95
0
75
47
7
14
30
1.71
41872--41929
27
2.2
26
81
12
64
24
15
12
48
1.79
47381--47494
29
3.9
29
92
0
183
14
34
28
22
1.93
47563--47594
14
2.3
14
100
0
64
6
28
43
21
1.77
47567--47629
10
5.6
11
76
17
51
11
28
34
25
1.90
47725--47781
29
2.0
29
85
0
78
17
38
22
21
1.93
49803--49885
41
2.0
41
100
0
166
38
25
7
28
1.82
51487--51848
162
2.2
162
89
1
539
18
30
10
40
1.85
51898--52214
162
2.0
161
84
4
415
18
32
10
38
1.85
51623--52140
277
1.9
277
86
3
747
18
32
11
37
1.86
54914--54953
20
2.0
20
85
0
53
27
5
0
67
1.11
55155--55330
88
2.0
88
97
0
334
27
22
23
25
2.00
60695--62314
543
3.0
542
82
4
1910
20
26
14
38
1.92

Tables:   1

The End!