Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007317.1 Hibiscus syriacus cultivar Beakdansim tig00019516_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33297

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3881--3968
39
2.2
40
88
9
128
29
31
11
27
1.91
6742--7196
177
2.6
177
84
7
583
42
14
15
27
1.86
9382--9422
21
2.0
21
90
0
64
41
12
26
19
1.87
9458--9521
31
2.0
33
87
6
96
32
0
43
23
1.54
9704--9801
29
3.6
27
81
14
128
53
0
43
3
1.16
14247--16536
182
12.6
182
93
1
3859
41
12
17
28
1.86
14248--16536
725
3.2
726
94
0
3955
41
12
17
28
1.86
14248--16536
905
2.5
906
95
0
4100
41
12
17
28
1.86
16673--16834
87
1.9
87
94
0
288
33
15
10
40
1.81
16756--16800
23
2.0
23
86
0
63
37
15
8
37
1.79
17853--17878
2
13.0
2
100
0
52
50
0
0
50
1.00
18162--18262
50
2.0
49
84
5
132
51
12
11
23
1.73
23343--23403
32
1.9
32
83
6
79
34
13
18
34
1.89
24802--24839
19
2.0
19
89
0
58
47
0
5
47
1.24
31445--31488
15
2.9
14
83
16
52
4
15
9
70
1.30

Tables:   1

The End!